Protein analysis
Sequence similarity
Protein interaction networks [2011-2017]
- Protein classification [1997-1998, 2007, 2015-2017]
- Protein motif analysis [2017]
- Identification of protein repeats [1995-2017]
- Protein domain analyses [2000-2017]
- Representation of protein properties [2006-2011]
- Formatting of HMMER output [2000]
RNAi screens [2014]
Prediction of subcellular location [1998, 2008-2013]
Prediction of secondary structure from CD spectra [1993-1994, 2008-2011]
Data mining
Association of genes, proteins and chemicals with biological function [2002-2017]
Analysis of MEDLINE [2001-2015]
Information extraction of biological features [1997-2003, 2010-2011]
Genomic analysis
Genome 3D structure [2017]
Transcript regulation [2014-2016]
Transcription factor binding site analyses [2012, 2016]
Genomic intraspecies variation [2014]
Transcript prediction [2008-2012]
Gene function prediction for complete genomes [1995-2003, 2010]
GeneQuiz development [1999-2000]
Gene expression data analysis
RNAseq experimental analysis [2013, 2017]
DNA microarray experimental analysis [2006-2015]
Gene expression methods [2005-2015]
Gene expression databases [2005-2014]
Pluripotency
[2007-2015]
Biological modelization
Self-organization of the visual nervous system [1994-2002]
Catalytic networks of self-replicative species [1991-1993]
General reviews and highlights
[1997, 2001, 2009, 2012]